
If you’re craving a sweet treat that feels wholesome yet indulgent, this Almond Flour Thumbprint Cookies Recipe is going to become your new obsession. These delightful little cookies combine the nutty richness of almond flour with a soft, tender texture and a burst of fruity jam in every bite. Perfect for a cozy afternoon snack or a beautiful homemade gift, this recipe is simple, quick, and intentionally crafted so every ingredient shines through. Trust me, once you make these, you’ll want to keep the jar filled all year round.
Ingredients You’ll Need

Keeping this recipe straightforward and approachable is part of its charm. Each ingredient plays an important role in giving the Almond Flour Thumbprint Cookies Recipe its perfectly tender crumb, gentle sweetness, and that irresistible golden color.
- 1 cup finely ground almond flour (packed): This is the star of the show, providing a moist, gluten-free base with a delicate nutty flavor.
- 3 Tablespoons ghee (or softened butter or vegan butter): Adds richness and helps the cookies hold together; ghee lends a subtle, caramel-like aroma.
- 3 Tablespoons maple syrup: A natural sweetener that brings gentle sweetness without overpowering.
- 1/2 teaspoon vanilla extract: Deepens the overall flavor and complements the nuttiness of the almond flour beautifully.
- 1/4 teaspoon salt: Enhances the sweetness and balances the flavors perfectly.
- 3 Tablespoons jam (homemade or store-bought): The classic thumbprint filling that adds bright, fruity notes and a lovely pop of color in the center.
How to Make Almond Flour Thumbprint Cookies Recipe
Step 1: Preheat your oven
Start by preheating your oven to 350°F. This ensures your cookies bake evenly and develop a nice golden bottom without overcooking the jam top.
Step 2: Prepare your baking surface
Line a baking sheet with parchment paper or use an un-greased baking stone. This will prevent sticking and help your cookies bake with a delicate crust underneath.
Step 3: Mix the dough
Combine the almond flour, softened ghee or butter, maple syrup, vanilla extract, and salt in a small bowl. At first, the dough may seem crumbly or dry, but keep mixing until it comes together into a cohesive ball. This gentle persistence will create a dough that’s soft yet workable.
Step 4: Shape each cookie
Using a tablespoon, scoop out dough and roll it gently into balls. Place each ball spaced out on your prepared baking sheet. Then, press your thumb or finger firmly in the center of each ball to create a small well — this is the thumbprint that will hold your jam.
Step 5: Add jam filling
Spoon about ½ to 1 teaspoon of your favorite jam into each indentation. Feel free to mix up flavors here — raspberry, apricot, or strawberry all work wonderfully and add a burst of fresh sweetness.
Step 6: Bake to perfection
Bake the cookies for 10 to 12 minutes, or until you see that beautiful golden-brown hue forming on the bottom edges. The aroma at this point will already have you reaching for one to taste!
Step 7: Cool and enjoy
Allow the cookies to cool on the baking sheet for 10 minutes so they firm up gently. Then transfer them to a wire rack to cool completely — this keeps them from becoming soggy and ensures that perfect tender texture.
How to Serve Almond Flour Thumbprint Cookies Recipe

Garnishes
While the jam itself is already a lovely finishing touch, you can add a light dusting of powdered sugar or a few almond slivers on top for extra visual appeal. A tiny sprinkle of flaky sea salt contrasts nicely with the sweet jam and enhances the almond notes.
Side Dishes
Pair these thumbprint cookies with a warm cup of herbal tea or a fresh latte to elevate a simple snack into a cozy moment. If you’re serving at a gathering, consider offering fresh fruit or a mild cheese plate alongside to complement the nutty flavors.
Creative Ways to Present
Arrange the cookies on a rustic wooden board with small bowls of different jams nearby for guests to experiment with extra fillings. You can even drizzle melted dark chocolate over them for a luxurious twist, turning this Almond Flour Thumbprint Cookies Recipe into a stunning dessert centerpiece.
Make Ahead and Storage
Storing Leftovers
These cookies keep beautifully in an airtight container stored in the refrigerator for up to one week. The cool helps maintain their shape and chewiness without drying them out.
Freezing
Want to make these ahead for a party or just keep a stash on hand? Freeze the cookies in a single layer, separated by parchment paper inside an airtight container. They’ll stay fresh for up to three months and defrost quickly when needed.
Reheating
To enjoy the cookies as if freshly baked, warm them gently in a 300°F oven for 5 minutes. This softens the almond flour texture and gives the jam a lovely, just-melted warmth.
FAQs
Can I use another type of flour instead of almond flour?
This recipe relies on almond flour for its signature moist texture and nutty flavor, but you could experiment with other nut flours like cashew or hazelnut. However, regular wheat flour will change the texture and is not recommended if you want that authentic almond crumb.
Is ghee necessary, or can I use butter?
Ghee offers a subtle nuttiness and lactose-free option, but softened unsalted butter or a vegan butter alternative works perfectly well here. Just keep the butter softened for easy mixing.
What’s the best type of jam for these cookies?
Any flavor you love will work, though thicker jams or preserves hold up best without running. Raspberry, strawberry, or apricot are classic favorites that add bright, balanced sweetness.
Are these cookies gluten-free?
Yes! Since they use almond flour instead of wheat flour, these thumbprint cookies are naturally gluten-free, making them a great treat for those with gluten sensitivities.
How long do these cookies stay fresh at room temperature?
Due to the moist almond flour and jam, they are best stored in the refrigerator within a day or two. At room temperature, they may become too soft or sticky after about 24 hours.
Final Thoughts
I can’t recommend this Almond Flour Thumbprint Cookies Recipe enough for anyone looking to bake something delightful with minimal fuss. These cookies capture that perfect blend of tender almond richness and fruity sweetness in a way that feels special but incredibly easy. So grab your mixing bowl, some jam, and get ready to fill your kitchen with the wonderful warmth of freshly baked thumbprint cookies. I promise, once you try them, they’ll be your go-to whenever you want a little homemade comfort.
Print
Almond Flour Thumbprint Cookies Recipe
- Total Time: 27 minutes
- Yield: 12 cookies
- Diet: Gluten Free
Description
These Almond Flour Thumbprint Cookies are a delicious, gluten-free treat made with almond flour, ghee, and sweetened naturally with maple syrup. Soft and buttery with a sweet jam center, they make the perfect snack or dessert for those seeking a refined sugar-free, grain-free option.
Ingredients
Cookie Dough
- 1 cup finely ground almond flour (packed)
- 3 Tablespoons ghee (softened butter or vegan butter; Earth Balance recommended)
- 3 Tablespoons maple syrup
- 1/2 teaspoon vanilla extract
- 1/4 teaspoon salt
Filling
- 3 Tablespoons jam (homemade or store-bought)
Instructions
- Preheat oven: Preheat your oven to 350°F to ensure it reaches the proper temperature for baking the cookies evenly.
- Prepare baking sheet: Line a baking sheet with parchment paper or use an ungreased baking stone to prevent the cookies from sticking and help them bake uniformly.
- Mix dough: In a small bowl, combine the almond flour, softened ghee (or butter), maple syrup, vanilla extract, and salt. Stir continuously until a cohesive dough forms; it may seem dry at first, but keep mixing until all ingredients are fully incorporated.
- Shape cookies: Using a tablespoon, scoop out portions of dough and roll each into a ball. Place them spaced evenly on the prepared baking sheet. Press your thumb or finger into the center of each ball to create an indentation for the jam.
- Add jam: Spoon 1/2 to 1 teaspoon of your chosen jam into the thumbprint indentation in each cookie.
- Bake cookies: Bake the cookies in the preheated oven for 10-12 minutes, until the bottoms begin to turn golden brown, indicating they are cooked through.
- Cool cookies: Remove the baking sheet from the oven and let the cookies cool on the pan for about 10 minutes to firm up. Then transfer them to a wire rack to cool completely before serving.
- Store: Store cooled cookies in an airtight container in the refrigerator for up to one week, or freeze them layered with parchment paper in an airtight container for up to three months.
Notes
- For a vegan version, use a plant-based butter alternative such as Earth Balance.
- Choose your favorite jam flavor for variety—homemade or store-bought both work well.
- Ensure almond flour is finely ground for best texture.
- Do not overbake to avoid dry cookies; watch for golden-brown bottoms.
- Cookies can be frozen for longer storage; thaw at room temperature before serving.
- Prep Time: 10 minutes
- Cook Time: 12 minutes
- Category: Dessert
- Method: Baking
- Cuisine: American